You have not mentioned that how the society made this decision to increase the maintenance charges and also to switch over to the sq. basis of charging the monthly maintenance amount.
If these changes were brought after passing a resolution passed by majority members in a special or general meeting of the society members, then all the members are to abide by the decision.
Whether you participated in the meeting or not?
If so, whether you objected to it in the meeting?
Have you given a written representation describing your grievances on this?
Did any other affected member take any steps to curb this extra burden?
What about other affected members, have they accepted the changes?
If not then you gather all of them and issue a notice to the association to reconsider the decision of charging exorbitant charges on very few members.
If necessary an extra ordinary meeting may be convened to decide about this request.
Alternately you an approach the registrar of cooperative society to get your grievances redressed.