If you have been informed that the pension amount has been regularised which is actually nothing but a reduced amount and you have been quoted the reason as well as the provisions of law for modifying the pension amount, you may first ascertain the facts
The OM what you referred may be of use to you to quote the relevant law in this regard in order to get relief.
You can first make a strong representation to the competent authority, i.e., your employer and request to cancel the orders passed by it which actually reduced the quantum of your pension.
If you do not get any proper response or your request is rejected, you may file a writ petition against the employer citing the supreme court judgment in this regard and knock the doors of the court to get justice.